#include "readdata.h"
#include <helpers.h>
#include <idtypes.h>
#include <idtypeshelpers.h>
#include <utils/LineNumberReader.h>
#include <boost/lexical_cast.hpp>
#include <utils/vectorsdata.h>
#include <boost/algorithm/string.hpp>
#include <numeric>
#include <legacy/binarygraphfilereader.h>

Macros
#define	NBSZGROUP 14

#define	NBAGE 11

Functions
void	open_file_error (string filename)

bool	read_config_file (string folder_name_parameterization, string inputfolder, int &nbpops, int &nbbenthospops, vector< int > &implicit_pops, vector< int > &implicit_pops_level2, vector< int > &grouped_tacs, vector< double > &calib_oth_landings, vector< double > &calib_w, vector< double > &calib_cpue, vector< types::NodeId > &interesting_harbours)

bool	read_config_file (std::istream &stream, int &nbpops, int &nbbenthospops, vector< int > &implicit_pops, vector< int > &implicit_pops_level2, vector< int > &grouped_tacs, vector< double > &calib_oth_landings, vector< double > &calib_w, vector< double > &calib_cpue, vector< types::NodeId > &interesting_harbours)

bool	read_scenario_config_file (string folder_name_parameterization, string inputfolder, string namefolderoutput, displace::commons::Scenario &scenario)

bool	read_scenario_config_file (std::istream &stream, displace::commons::Scenario &scenario)

vector< int >	read_tsteps_quarters (string folder_name_parameterization, string inputfolder)

vector< int >	read_tsteps_semesters (string folder_name_parameterization, string inputfolder)

vector< int >	read_tsteps_months (string folder_name_parameterization, string inputfolder)

vector< int >	read_tsteps_years (string folder_name_parameterization, string inputfolder)

bool	read_vessels_features (string a_quarter, vector< string > &vesselids, vector< int > &vid_is_actives, vector< int > &vid_is_part_of_ref_fleets, vector< double > &speeds, vector< double > &fuelcons, vector< double > &lengths, vector< double > &vKWs, vector< double > &carrycapacities, vector< double > &tankcapacities, vector< double > &nbfpingspertrips, vector< double > &resttime_par1s, vector< double > &resttime_par2s, vector< double > &av_trip_duration, vector< double > &mult_fuelcons_when_steaming, vector< double > &mult_fuelcons_when_fishing, vector< double > &mult_fuelcons_when_returning, vector< double > &mult_fuelcons_when_inactive, vector< int > &firm_ids, string folder_name_parameterization, string inputfolder, int selected_vessels_only, vector< VesselCalendar > &calendars)

bool	read_vessels_economics_features (vector< string > &vesselids, vector< double > &this_vessel_nb_crews, vector< double > &annual_other_incomes, vector< double > &landing_costs_percents, vector< double > &crewshare_and_unpaid_labour_costs_percents, vector< double > &other_variable_costs_per_unit_efforts, vector< double > &annual_insurance_costs_per_crews, vector< double > &standard_labour_hour_opportunity_costss, vector< double > &standard_annual_full_time_employement_hourss, vector< double > &other_annual_fixed_costss, vector< double > &vessel_values, vector< double > &annual_depreciation_rates, vector< double > &opportunity_interest_rates, vector< double > &annual_discount_rates, string folder_name_parameterization, string inputfolder)

bool	read_firms_features (vector< int > &firm_ids, vector< string > &firm_names, vector< int > &nb_vessels, vector< double > &longs, vector< double > &lats, string folder_name_parameterization, string inputfolder)

bool	read_fishfarms_features (vector< int > &fishfarms_ids, vector< string > &fishfarms_names, vector< int > &idx_nodes, vector< int > &is_actives, vector< double > &sizes, vector< double > &longs, vector< double > &lats, vector< double > &mean_SSTs, vector< double > &mean_salinities, vector< double > &mean_windspeeds, vector< double > &mean_currentspeeds, vector< double > &max_depths, vector< double > &diss_O2_mg_per_ls, vector< double > &Linf_mms, vector< double > &K_ys, vector< double > &t0_ys, vector< double > &fulton_condition_factors, vector< string > &meanw_growth_model_types, vector< int > &start_day_growings, vector< int > &end_day_harvests, vector< int > &nbyears_for_growths, vector< int > &nb_days_fallowing_periods, vector< int > &nb_fish_at_starts, vector< double > &meanw_at_starts, vector< double > &price_per_kg_at_starts, vector< double > &target_meanw_at_harvests, vector< int > &nb_fish_at_harvests, vector< double > &meanw_at_harvests, vector< double > &prop_harvest_kg_solds, vector< double > &kg_eggs_per_kgs, vector< double > &price_eggs_per_kgs, vector< double > &N_in_fish_kg_3pers, vector< double > &P_in_fish_kg_0_5pers, vector< string > &feed_types, vector< double > &feed_price_per_kgs, vector< double > &total_feed_kgs, vector< double > &prop_N_in_feeds, vector< double > &prop_P_in_feeds, vector< double > &total_feed_N_kgs, vector< double > &total_feed_P_kgs, vector< string > &feed_type_vets, vector< double > &feed_vet_price_per_kgs, vector< double > &total_feed_vet_kgs, vector< double > &prop_N_in_feed_vets, vector< double > &prop_P_in_feed_vets, vector< double > &total_feed_vet_N_kgs, vector< double > &total_feed_vet_P_kgs, vector< double > &annual_discharge_N_kgs, vector< double > &annual_discharge_P_kgs, vector< double > &annual_discharge_C_kgs, vector< double > &annual_discharge_heavymetals_kgs, vector< double > &annual_discharge_medecine_kgs, vector< double > &net_harvest_kg_per_sqkm_ys, vector< double > &market_price_sold_fishs, vector< double > &operating_cost_per_days, vector< double > &annual_profits, string folder_name_parameterization, string inputfolder)

bool	read_ships_features (vector< string > &shipids, vector< double > &imos, vector< double > &yearbuilds, vector< string > &flags, vector< string > &types, vector< double > &typecodes, vector< double > &loas, vector< double > &KWs, vector< double > &breadths, vector< double > &grosstonnages, vector< double > &nbunits, vector< double > &fueluses, vector< double > &NOxEmission_gperKWhs, vector< double > &SOxEmission_percentpertotalfuelmasss, vector< double > &GHGEmissions, vector< double > &PMEmissions, vector< double > &vmaxs, vector< double > &vcruises, vector< double > &lane_ids, string folder_name_parameterization, string inputfolder)

multimap< types::NodeId, string >	read_harbour_names (string folder_name_parameterization, string inputfolder)

int	read_prices_per_harbour (types::NodeId i, string a_quarter, multimap< string, double > &prices_per_harbour, string folder_name_parameterization, string inputfolder)

void	read_pop_names_in_string (map< int, string > &pop_names, string folder_name_parameterization, string inputfolder)

void	read_fuel_prices_per_vsize (types::NodeId i, string a_quarter, map< int, double > &fuel_prices_per_vsize, string folder_name_parameterization, string inputfolder)

int	read_prices_per_harbour_each_pop_per_cat (types::NodeId i, string a_quarter, multimap< int, double > &prices_per_harbour_each_species_per_cat, string folder_name_parameterization, string inputfolder)

multimap< string, types::NodeId >	read_fgrounds (string a_quarter, string folder_name_parameterization, string inputfolder)

multimap< string, types::NodeId >	read_fgrounds_init (string a_quarter, string folder_name_parameterization, string inputfolder)

multimap< string, types::NodeId >	read_harbours (string a_quarter, string folder_name_parameterization, string inputfolder)

multimap< string, double >	read_freq_fgrounds (string a_quarter, string folder_name_parameterization, string inputfolder)

multimap< string, double >	read_freq_fgrounds_init (string a_quarter, string folder_name_parameterization, string inputfolder)

multimap< string, double >	read_freq_harbours (string a_quarter, string folder_name_parameterization, string inputfolder)

multimap< string, double >	read_vessels_betas (string a_semester, string folder_name_parameterization, string inputfolder)

multimap< string, double >	read_vessels_tacs (string a_semester, string folder_name_parameterization, string inputfolder)

multimap< string, double >	read_initial_fishing_credits (string folder_name_parameterization, string inputfolder)

multimap< types::NodeId, int >	read_possible_metiers (string a_quarter, string a_vessel, string folder_name_parameterization, string inputfolder)

multimap< types::NodeId, double >	read_freq_possible_metiers (string a_quarter, string a_vessel, string folder_name_parameterization, string inputfolder)

multimap< types::NodeId, double >	read_cpue_per_stk_on_nodes (string a_quarter, string a_vessel, string folder_name_parameterization, string inputfolder)

multimap< types::NodeId, double >	read_gshape_cpue_per_stk_on_nodes (string a_quarter, string a_vessel, string folder_name_parameterization, string inputfolder)

multimap< types::NodeId, double >	read_gscale_cpue_per_stk_on_nodes (string a_quarter, string a_vessel, string folder_name_parameterization, string inputfolder)

multimap< types::NodeId, double >	read_initial_tariffs_on_nodes (string folder_name_parameterization, string inputfolder, string a_graph_name)

multimap< int, double >	read_sel_ogives (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_loss_after_1_passage_per_landscape_per_func_group (int a_met, string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_logistic_recovery_rates_per_month_per_funcgr (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_habitat_deltas_per_pop (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_benthos_biomass_carrying_capacity_K_per_landscape_per_funcgr (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_benthos_number_carrying_capacity_K_per_landscape_per_funcgr (string folder_name_parameterization, string inputfolder)

multimap< int, int >	read_metier_target_stocks (int a_met, string folder_name_parameterization, string inputfolder)

multimap< int, int >	read_metier_suitable_seabottomtypes (int a_met, string folder_name_parameterization, string inputfolder)

map< int, int >	read_metiers_types (string folder_name_parameterization, string inputfolder)

map< int, double >	read_percent_revenue_completenesses (string folder_name_parameterization, string inputfolder)

map< int, double >	read_metiers_fspeed (string folder_name_parameterization, string inputfolder)

map< int, double >	read_gear_widths_param_a (string folder_name_parameterization, string inputfolder)

map< int, double >	read_gear_widths_param_b (string folder_name_parameterization, string inputfolder)

map< int, string >	read_gear_widths_model_type (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_dis_ogives (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_metiers_betas (string a_semester, string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_discardratio_limits (string a_semester, string folder_name_parameterization, string inputfolder)

multimap< int, int >	read_is_avoided_stocks (string a_semester, string folder_name_parameterization, string inputfolder)

multimap< int, int >	read_metiers_mls_cat (string a_semester, string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_prop_funcgr_biomass_per_node_per_landscape (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_prop_funcgr_number_per_node_per_landscape (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_meanw_funcgr_per_landscape (string folder_name_parameterization, string inputfolder)

map< int, double >	read_size_per_farm (string folder_name_parameterization, string inputfolder)

map< int, double >	read_size_per_windmill (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_shiplanes_lat (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_shiplanes_lon (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_avai_betas (string a_semester, string szgroup, string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_init_pops_per_szgroup (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, double >	read_adults_diet_preference_per_stock_allstks (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, double >	read_juveniles_diet_preference_per_stock_allstks (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, double >	read_init_prop_migrants_pops_per_szgroup (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, double >	read_init_maturity_per_szgroup (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, double >	read_init_fecundity_per_szgroup (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, double >	read_init_weight_per_szgroup (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, int >	read_init_comcat_per_szgroup (string folder_name_parameterization, string inputfolder)

multimap< int, double >	read_init_M_per_szgroup (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, double >	read_init_proprecru_per_szgroup (string folder_name_parameterization, string inputfolder, string biolsce)

multimap< int, types::NodeId >	read_lst_idx_nodes_per_pop (string a_semester, string folder_name_parameterization, string inputfolder, string str_rand_avai_file)

multimap< int, int >	read_selected_szgroups_per_pop (string folder_name_parameterization, string inputfolder)

map< int, int >	read_tac_percent_simulated (string folder_name_parameterization, string inputfolder)

map< int, double >	read_hyperstability_param (string folder_name_parameterization, string inputfolder)

map< types::NodeId, double >	read_oth_land_nodes_with_pop (string a_semester, string a_month, int a_pop, string folder_name_parameterization, string inputfolder, string fleetsce)

multimap< int, double >	read_overall_migration_fluxes (string a_semester, int a_pop, string folder_name_parameterization, string inputfolder, string biolsce)

map< string, double >	read_relative_stability_keys (string a_semester, int a_pop, string folder_name_parameterization, string inputfolder)

multimap< types::NodeId, double >	read_avai_szgroup_nodes_with_pop (string a_semester, int a_pop, string folder_name_parameterization, string inputfolder, string str_rand_avai_file, string type_of_avai_field_to_read)

multimap< types::NodeId, double >	read_full_avai_szgroup_nodes_with_pop (string a_semester, int a_pop, string folder_name_parameterization, string inputfolder, string str_rand_avai_file, string type_of_avai_field_to_read)

multimap< types::NodeId, double >	read_field_of_coeff_diffusion_this_pop (string a_semester, int a_pop, string folder_name_parameterization, string inputfolder, string biolsce)

vector< vector< double > >	read_percent_szgroup_per_age_matrix (int a_pop, int nbszgroup, int nbage, string folder_name_parameterization, string inputfolder, string biolsce)

vector< vector< double > >	read_percent_age_per_szgroup_matrix (int a_pop, int nbszgroup, int nbage, string folder_name_parameterization, string inputfolder, string biolsce)

vector< vector< double > >	read_growth_transition_matrix (int a_pop, int nbszgroup, string folder_name_parameterization, string inputfolder, string biolsce)

vector< vector< double > >	read_preferences_for_species_matrix (int a_pop, int nbpops, int nbszgroup, string folder_name_parameterization, string inputfolder, string biolsce)

vector< vector< double > >	read_species_interactions_mortality_proportion_matrix (int nbpops, string folder_name_parameterization, string inputfolder, string biolsce)

vector< vector< double > >	read_selectivity_per_stock_ogives (int a_met, int nbpops, int nbszgroup, string folder_name_parameterization, string inputfolder, string fleetsce)

vector< vector< double > >	read_selectivity_per_stock_ogives_for_oth_land (int nbpops, int nbszgroup, string folder_name_parameterization, string inputfolder, string fleetsce)

vector< double >	read_param_sr (int a_pop, string folder_name_parameterization, string inputfolder, string biolsce)

vector< double >	read_initial_tac (int a_pop, string folder_name_parameterization, string inputfolder)

vector< double >	read_fbar_ages_min_max_and_ftarget (int a_pop, string folder_name_parameterization, string inputfolder, string biolsce)

spp::sparse_hash_map< types::NodeId::type, types::NodeId::type >	read_maps_previous (types::NodeId source, string namesimu, string inputfolder, string a_graph_name)

spp::sparse_hash_map< types::NodeId::type, int >	read_min_distance (types::NodeId source, string namesimu, string inputfolder, string a_graph_name)

PathShop	read_graph_details (types::NodeId source, string namesimu, string inputfolder, string a_graph_name)

multimap< int, int >	read_nodes_in_polygons (string a_quarter, string a_graph, string folder_name_parameterization, string inputfolder)

bool	read_metier_quarterly_closures (vector< Node * > &nodes, string a_quarter, string a_graph, string folder_name_parameterization, string inputfolder)

bool	read_metier_monthly_closures (vector< Node * > &nodes, string a_month, string a_graph, string folder_name_parameterization, string inputfolder)

bool	read_metier_closures (istream &stream, const std::string &separator, vector< NodeBanningInfo > &nodes)

bool	read_vsize_monthly_closures (vector< Node * > &nodes, string a_month, string a_graph, string folder_name_parameterization, string inputfolder)

bool	read_vsize_closures (istream &stream, const std::string &separator, vector< NodeBanningInfo > &nodes)

bool	read_biological_traits_params (istream &stream, const std::string &separator, std::vector< std::tuple< string, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, string > > &biological_traits_params)

bool	read_environment_on_coord (istream &stream, const std::string &separator, std::vector< EnvironmentDataRecord > &environment_on_coord)

void	write_SMS_OP_N_in_file (ofstream &SMS_N_in, vector< Population * > &populations, vector< int > stock_numbers, vector< int > some_units, vector< int > some_max_nb_ages)

void	write_SMS_OP_F_in_file (ofstream &SMS_F_in, vector< Population * > &populations, vector< int > stock_numbers)

void	read_SMS_OP_N_out_file (vector< Population * > &populations, vector< int > stock_numbers, vector< int > some_units, vector< int > some_max_nb_ages, string sms_folder, string namesimu)

string	getLastErrorMessage ()

Macro Definition Documentation

◆ NBAGE

#define NBAGE 11

◆ NBSZGROUP

#define NBSZGROUP 14

Function Documentation

◆ getLastErrorMessage()

string getLastErrorMessage ( )

◆ open_file_error()

void open_file_error ( string filename )

◆ read_adults_diet_preference_per_stock_allstks()

multimap<int, double> read_adults_diet_preference_per_stock_allstks	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_avai_betas()

multimap<int, double> read_avai_betas	(	string	a_semester,
		string	szgroup,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_avai_szgroup_nodes_with_pop()

multimap<types::NodeId, double> read_avai_szgroup_nodes_with_pop	(	string	a_semester,
		int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder,
		string	str_rand_avai_file,
		string	type_of_avai_field_to_read
	)

◆ read_benthos_biomass_carrying_capacity_K_per_landscape_per_funcgr()

multimap<int, double> read_benthos_biomass_carrying_capacity_K_per_landscape_per_funcgr	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_benthos_number_carrying_capacity_K_per_landscape_per_funcgr()

multimap<int, double> read_benthos_number_carrying_capacity_K_per_landscape_per_funcgr	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_biological_traits_params()

bool read_biological_traits_params	(	istream &	stream,
		const std::string &	separator,
		std::vector< std::tuple< string, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, string > > &	biological_traits_params
	)

◆ read_config_file() [1/2]

bool read_config_file	(	string	folder_name_parameterization,
		string	inputfolder,
		int &	nbpops,
		int &	nbbenthospops,
		vector< int > &	implicit_pops,
		vector< int > &	implicit_pops_level2,
		vector< int > &	grouped_tacs,
		vector< double > &	calib_oth_landings,
		vector< double > &	calib_w,
		vector< double > &	calib_cpue,
		vector< types::NodeId > &	interesting_harbours
	)

read the settings for the siums given the case study

Parameters

the	vectors to be filled in, ...

◆ read_config_file() [2/2]

bool read_config_file	(	std::istream &	stream,
		int &	nbpops,
		int &	nbbenthospops,
		vector< int > &	implicit_pops,
		vector< int > &	implicit_pops_level2,
		vector< int > &	grouped_tacs,
		vector< double > &	calib_oth_landings,
		vector< double > &	calib_w,
		vector< double > &	calib_cpue,
		vector< types::NodeId > &	interesting_harbours
	)

◆ read_cpue_per_stk_on_nodes()

multimap<types::NodeId, double> read_cpue_per_stk_on_nodes	(	string	a_quarter,
		string	a_vessel,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_dis_ogives()

multimap<int, double> read_dis_ogives	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_discardratio_limits()

multimap<int, double> read_discardratio_limits	(	string	a_semester,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_environment_on_coord()

bool read_environment_on_coord	(	istream &	stream,
		const std::string &	separator,
		std::vector< EnvironmentDataRecord > &	environment_on_coord
	)

◆ read_fbar_ages_min_max_and_ftarget()

vector<double> read_fbar_ages_min_max_and_ftarget	(	int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_fgrounds()

multimap<string, types::NodeId> read_fgrounds	(	string	a_quarter,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_fgrounds_init()

multimap<string, types::NodeId> read_fgrounds_init	(	string	a_quarter,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_field_of_coeff_diffusion_this_pop()

multimap<types::NodeId, double> read_field_of_coeff_diffusion_this_pop	(	string	a_semester,
		int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_firms_features()

bool read_firms_features	(	vector< int > &	firm_ids,
		vector< string > &	firm_names,
		vector< int > &	nb_vessels,
		vector< double > &	longs,
		vector< double > &	lats,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_fishfarms_features()

bool read_fishfarms_features	(	vector< int > &	fishfarms_ids,
		vector< string > &	fishfarms_names,
		vector< int > &	idx_nodes,
		vector< int > &	is_actives,
		vector< double > &	sizes,
		vector< double > &	longs,
		vector< double > &	lats,
		vector< double > &	mean_SSTs,
		vector< double > &	mean_salinities,
		vector< double > &	mean_windspeeds,
		vector< double > &	mean_currentspeeds,
		vector< double > &	max_depths,
		vector< double > &	diss_O2_mg_per_ls,
		vector< double > &	Linf_mms,
		vector< double > &	K_ys,
		vector< double > &	t0_ys,
		vector< double > &	fulton_condition_factors,
		vector< string > &	meanw_growth_model_types,
		vector< int > &	start_day_growings,
		vector< int > &	end_day_harvests,
		vector< int > &	nbyears_for_growths,
		vector< int > &	nb_days_fallowing_periods,
		vector< int > &	nb_fish_at_starts,
		vector< double > &	meanw_at_starts,
		vector< double > &	price_per_kg_at_starts,
		vector< double > &	target_meanw_at_harvests,
		vector< int > &	nb_fish_at_harvests,
		vector< double > &	meanw_at_harvests,
		vector< double > &	prop_harvest_kg_solds,
		vector< double > &	kg_eggs_per_kgs,
		vector< double > &	price_eggs_per_kgs,
		vector< double > &	N_in_fish_kg_3pers,
		vector< double > &	P_in_fish_kg_0_5pers,
		vector< string > &	feed_types,
		vector< double > &	feed_price_per_kgs,
		vector< double > &	total_feed_kgs,
		vector< double > &	prop_N_in_feeds,
		vector< double > &	prop_P_in_feeds,
		vector< double > &	total_feed_N_kgs,
		vector< double > &	total_feed_P_kgs,
		vector< string > &	feed_type_vets,
		vector< double > &	feed_vet_price_per_kgs,
		vector< double > &	total_feed_vet_kgs,
		vector< double > &	prop_N_in_feed_vets,
		vector< double > &	prop_P_in_feed_vets,
		vector< double > &	total_feed_vet_N_kgs,
		vector< double > &	total_feed_vet_P_kgs,
		vector< double > &	annual_discharge_N_kgs,
		vector< double > &	annual_discharge_P_kgs,
		vector< double > &	annual_discharge_C_kgs,
		vector< double > &	annual_discharge_heavymetals_kgs,
		vector< double > &	annual_discharge_medecine_kgs,
		vector< double > &	net_harvest_kg_per_sqkm_ys,
		vector< double > &	market_price_sold_fishs,
		vector< double > &	operating_cost_per_days,
		vector< double > &	annual_profits,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_freq_fgrounds()

multimap<string, double> read_freq_fgrounds	(	string	a_quarter,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_freq_fgrounds_init()

multimap<string, double> read_freq_fgrounds_init	(	string	a_quarter,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_freq_harbours()

multimap<string, double> read_freq_harbours	(	string	a_quarter,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_freq_possible_metiers()

multimap<types::NodeId, double> read_freq_possible_metiers	(	string	a_quarter,
		string	a_vessel,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_fuel_prices_per_vsize()

void read_fuel_prices_per_vsize	(	types::NodeId	i,
		string	a_quarter,
		map< int, double > &	fuel_prices_per_vsize,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_full_avai_szgroup_nodes_with_pop()

multimap<types::NodeId, double> read_full_avai_szgroup_nodes_with_pop	(	string	a_semester,
		int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder,
		string	str_rand_avai_file,
		string	type_of_avai_field_to_read
	)

◆ read_gear_widths_model_type()

map<int, string> read_gear_widths_model_type	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_gear_widths_param_a()

map<int, double> read_gear_widths_param_a	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_gear_widths_param_b()

map<int, double> read_gear_widths_param_b	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_graph_details()

PathShop read_graph_details	(	types::NodeId	source,
		string	namesimu,
		string	inputfolder,
		string	a_graph_name
	)

◆ read_growth_transition_matrix()

vector< vector<double> > read_growth_transition_matrix	(	int	a_pop,
		int	nbszgroup,
		string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_gscale_cpue_per_stk_on_nodes()

multimap<types::NodeId, double> read_gscale_cpue_per_stk_on_nodes	(	string	a_quarter,
		string	a_vessel,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_gshape_cpue_per_stk_on_nodes()

multimap<types::NodeId, double> read_gshape_cpue_per_stk_on_nodes	(	string	a_quarter,
		string	a_vessel,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_habitat_deltas_per_pop()

multimap<int, double> read_habitat_deltas_per_pop	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_harbour_names()

multimap<types::NodeId, string> read_harbour_names	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_harbours()

multimap<string, types::NodeId> read_harbours	(	string	a_quarter,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_hyperstability_param()

map<int, double> read_hyperstability_param	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_init_comcat_per_szgroup()

multimap<int, int> read_init_comcat_per_szgroup	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_init_fecundity_per_szgroup()

multimap<int, double> read_init_fecundity_per_szgroup	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_init_M_per_szgroup()

multimap<int, double> read_init_M_per_szgroup	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_init_maturity_per_szgroup()

multimap<int, double> read_init_maturity_per_szgroup	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_init_pops_per_szgroup()

multimap<int, double> read_init_pops_per_szgroup	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_init_prop_migrants_pops_per_szgroup()

multimap<int, double> read_init_prop_migrants_pops_per_szgroup	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_init_proprecru_per_szgroup()

multimap<int, double> read_init_proprecru_per_szgroup	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_init_weight_per_szgroup()

multimap<int, double> read_init_weight_per_szgroup	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_initial_fishing_credits()

multimap<string, double> read_initial_fishing_credits	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_initial_tac()

vector<double> read_initial_tac	(	int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_initial_tariffs_on_nodes()

multimap<types::NodeId, double> read_initial_tariffs_on_nodes	(	string	folder_name_parameterization,
		string	inputfolder,
		string	a_graph_name
	)

◆ read_is_avoided_stocks()

multimap<int, int> read_is_avoided_stocks	(	string	a_semester,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_juveniles_diet_preference_per_stock_allstks()

multimap<int, double> read_juveniles_diet_preference_per_stock_allstks	(	string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_logistic_recovery_rates_per_month_per_funcgr()

multimap<int, double> read_logistic_recovery_rates_per_month_per_funcgr	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_loss_after_1_passage_per_landscape_per_func_group()

multimap<int, double> read_loss_after_1_passage_per_landscape_per_func_group	(	int	a_met,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_lst_idx_nodes_per_pop()

multimap<int, types::NodeId> read_lst_idx_nodes_per_pop	(	string	a_semester,
		string	folder_name_parameterization,
		string	inputfolder,
		string	str_rand_avai_file
	)

◆ read_maps_previous()

spp::sparse_hash_map<types::NodeId::type, types::NodeId::type> read_maps_previous	(	types::NodeId	source,
		string	namesimu,
		string	inputfolder,
		string	a_graph_name
	)

◆ read_meanw_funcgr_per_landscape()

multimap<int, double> read_meanw_funcgr_per_landscape	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_metier_closures()

bool read_metier_closures	(	istream &	stream,
		const std::string &	separator,
		vector< NodeBanningInfo > &	nodes
	)

◆ read_metier_monthly_closures()

bool read_metier_monthly_closures	(	vector< Node * > &	nodes,
		string	a_month,
		string	a_graph,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_metier_quarterly_closures()

bool read_metier_quarterly_closures	(	vector< Node * > &	nodes,
		string	a_quarter,
		string	a_graph,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_metier_suitable_seabottomtypes()

multimap<int, int> read_metier_suitable_seabottomtypes	(	int	a_met,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_metier_target_stocks()

multimap<int, int> read_metier_target_stocks	(	int	a_met,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_metiers_betas()

multimap<int, double> read_metiers_betas	(	string	a_semester,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_metiers_fspeed()

map<int, double> read_metiers_fspeed	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_metiers_mls_cat()

multimap<int, int> read_metiers_mls_cat	(	string	a_semester,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_metiers_types()

map<int, int> read_metiers_types	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_min_distance()

spp::sparse_hash_map<types::NodeId::type, int> read_min_distance	(	types::NodeId	source,
		string	namesimu,
		string	inputfolder,
		string	a_graph_name
	)

◆ read_nodes_in_polygons()

multimap<int, int> read_nodes_in_polygons	(	string	a_quarter,
		string	a_graph,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_oth_land_nodes_with_pop()

map<types::NodeId, double> read_oth_land_nodes_with_pop	(	string	a_semester,
		string	a_month,
		int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder,
		string	fleetsce
	)

◆ read_overall_migration_fluxes()

multimap<int, double> read_overall_migration_fluxes	(	string	a_semester,
		int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_param_sr()

vector<double> read_param_sr	(	int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_percent_age_per_szgroup_matrix()

vector< vector<double> > read_percent_age_per_szgroup_matrix	(	int	a_pop,
		int	nbszgroup,
		int	nbage,
		string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_percent_revenue_completenesses()

map<int, double> read_percent_revenue_completenesses	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_percent_szgroup_per_age_matrix()

vector< vector<double> > read_percent_szgroup_per_age_matrix	(	int	a_pop,
		int	nbszgroup,
		int	nbage,
		string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_pop_names_in_string()

void read_pop_names_in_string	(	map< int, string > &	pop_names,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_possible_metiers()

multimap<types::NodeId, int> read_possible_metiers	(	string	a_quarter,
		string	a_vessel,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_preferences_for_species_matrix()

vector< vector<double> > read_preferences_for_species_matrix	(	int	a_pop,
		int	nbpops,
		int	nbszgroup,
		string	folder_name_parameterization,
		string	inputfolder,
		string	biolsce
	)

◆ read_prices_per_harbour()

int read_prices_per_harbour	(	types::NodeId	i,
		string	a_quarter,
		multimap< string, double > &	prices_per_harbour,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_prices_per_harbour_each_pop_per_cat()

int read_prices_per_harbour_each_pop_per_cat	(	types::NodeId	i,
		string	a_quarter,
		multimap< int, double > &	prices_per_harbour_each_species_per_cat,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_prop_funcgr_biomass_per_node_per_landscape()

multimap<int, double> read_prop_funcgr_biomass_per_node_per_landscape	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_prop_funcgr_number_per_node_per_landscape()

multimap<int, double> read_prop_funcgr_number_per_node_per_landscape	(	string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_relative_stability_keys()

map<string, double> read_relative_stability_keys	(	string	a_semester,
		int	a_pop,
		string	folder_name_parameterization,
		string	inputfolder
	)

◆ read_scenario_config_file() [1/2]

bool read_scenario_config_file	(	string	folder_name_parameterization,
		string	inputfolder,
		string	namefolderoutput,
		displace::commons::Scenario &	scenario
	)

read the scenario specific settings for the siums given the case study