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DISPLACE
1.0
A spatial model of fisheries to help sustainable fishing and maritime spatial planning
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DISPLACE
1.0
A spatial model of fisheries to help sustainable fishing and maritime spatial planning
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This is the complete list of members for Population, including all inherited members.
| add_recruits_from_a_fixed_number() | Population | |
| add_recruits_from_eggs() | Population | |
| add_recruits_from_SR() | Population | |
| add_to_landings_at_end_of_years(double value) | Population | |
| aggregate_N() | Population | |
| apply_natural_mortality() | Population | |
| apply_overall_migration_fluxes(vector< Population * > &populations) | Population | |
| clear_tot_C_at_szgroup() | Population | |
| clear_tot_D_at_szgroup() | Population | |
| clear_tot_F_at_age() | Population | |
| clear_tot_M_at_age() | Population | |
| compute_fbar() | Population | |
| compute_proportion_mature_fish() | Population | |
| compute_SSB() | Population | |
| compute_tot_M_at_age() | Population | |
| compute_tot_N_and_F_and_W_at_age(int a_month_i) | Population | |
| diffuse_N_from_field(adjacency_map_t &adjacency_map) | Population | |
| distribute_N() | Population | |
| do_growth() | Population | |
| export_popdyn_annual_indic(ofstream &popdyn_annual_indic, int tstep, const DynAllocOptions &dyn_alloc_sce) | Population | |
| export_popdyn_F(ofstream &popdyn_F, int tstep) | Population | |
| export_popdyn_N(ofstream &popdyn_N, int tstep) | Population | |
| export_popdyn_SSB(ofstream &popdyn_SSB, int tstep) | Population | |
| get_a_tot_N_at_szgroup_before_applying_M() const | Population | |
| get_avai0_beta() const | Population | |
| get_avai2_beta() const | Population | |
| get_avai3_beta() const | Population | |
| get_avai5_beta() const | Population | |
| get_avai7_beta() const | Population | |
| get_comcat_at_szgroup() const | Population | |
| get_cpue_multiplier() const | Population | |
| get_fbar() const | Population | |
| get_fbar_ages_min_max() const | Population | |
| get_fecundity_at_szgroup() const | Population | |
| get_FFmsy() const | Population | |
| get_field_of_coeff_diffusion_this_pop() const | Population | |
| get_full_spatial_availability() const | Population | |
| get_growth_transition_matrix() const | Population | |
| get_hyperstability_param() const | Population | |
| get_is_choking_fisheries() const | Population | |
| get_landings_at_end_of_years() const | Population | |
| get_landings_so_far() const | Population | |
| get_list_nodes() const | Population | |
| get_M_at_szgroup() const | Population | |
| get_maturity_at_szgroup() const | Population | |
| get_name() const | Population | |
| get_nb_ages() const | Population | |
| get_nb_szgroups() const | Population | |
| get_oth_land() const | Population | |
| get_oth_land_multiplier() const | Population | |
| get_overall_migration_fluxes() const | Population | |
| get_param_sr() const | Population | |
| get_perceived_tot_F_at_age() const | Population | |
| get_perceived_tot_N_at_age() const | Population | |
| get_percent_age_per_szgroup_matrix() const | Population | |
| get_percent_szgroup_per_age_matrix() const | Population | |
| get_pop_name() const | Population | |
| get_prop_migrants_in_tot_N_at_szgroup() const | Population | |
| get_proportion_mature_fish() const | Population | |
| get_proprecru_at_szgroup() const | Population | |
| get_quota() const | Population | |
| get_quota_uptake() const | Population | |
| get_selected_szgroups() const | Population | |
| get_SSB() const | Population | |
| get_SSB_at_szgroup() const | Population | |
| get_tac() const | Population | |
| get_tot_C_at_szgroup() const | Population | |
| get_tot_D_at_szgroup() const | Population | |
| get_tot_F_at_age() const | Population | |
| get_tot_F_at_age_last_quarter() const | Population | |
| get_tot_F_at_age_running_average() const | Population | |
| get_tot_M_at_age() const | Population | |
| get_tot_Mat_at_age() const | Population | |
| get_tot_N_at_age() const | Population | |
| get_tot_N_at_age0() const | Population | |
| get_tot_N_at_age_last_quarter() const | Population | |
| get_tot_N_at_szgroup() const | Population | |
| get_tot_N_at_szgroup_just_after_redistribution() const | Population | |
| get_tot_N_at_szgroup_month_minus_1() const | Population | |
| get_tot_N_at_szgroup_year_minus_1() const | Population | |
| get_tot_W_at_age() const | Population | |
| get_true_tot_N_at_szgroup() const | Population | |
| get_weight_at_szgroup() const | Population | |
| Population(int name, string pop_name, double _avai0_beta, double _avai2_beta, double _avai3_beta, double _avai5_beta, double _avai7_beta, const vector< int > &selected_szgroups, const vector< double > &init_tot_N_at_szgroup, const vector< double > &init_prop_migrants_in_tot_N_at_szgroup, const vector< double > &init_fecundity_at_szgroup, vector< double > init_weight_at_szgroup, const vector< int > &init_comcat_at_szgroup, const vector< double > &init_maturity_at_szgroup, vector< double > init_M_at_szgroup, const vector< double > &init_proprecru_at_szgroup, const vector< double > ¶m_sr, const multimap< int, types::NodeId > &lst_idx_nodes_per_pop, const multimap< types::NodeId, double > &full_spatial_availability, const multimap< types::NodeId, double > &field_of_coeff_diffusion_this_pop, const map< types::NodeId, double > &oth_land, const multimap< int, double > &overall_migration_fluxes, const map< string, double > &relative_stability_key, const vector< vector< double > > &percent_szgroup_per_age_matrix, const vector< vector< double > > &percent_age_perszgroup_matrix, const vector< vector< double > > &growth_transition_matrix, const vector< Node * > &nodes, const vector< double > &fbar_ages_min_max, const vector< double > &init_tac, double tac_percent_simulated, double hyperstability_param, double landings_so_far, double a_calib_cpue_multiplier, double a_calib_weight_at_szgroup) | Population | |
| Population() | Population | |
| set_a_tot_N_at_szgroup_before_applying_M(const vector< double > &_a_tot_N_at_szgroup_before_applying_M) | Population | |
| set_adults_diet_preference_per_stock(const vector< double > &_adults_diet_preference_per_stock) | Population | |
| set_avai0_beta(double _avai0_beta) | Population | |
| set_avai2_beta(double _avai2_beta) | Population | |
| set_avai3_beta(double _avai3_beta) | Population | |
| set_avai5_beta(double _avai5_beta) | Population | |
| set_avai7_beta(double _avai7_beta) | Population | |
| set_comcat_at_szgroup(vector< int > _comcat_at_szgroup) | Population | |
| set_cpue_multiplier(double _cpue_multiplier) | Population | |
| set_fbar(double _fbar) | Population | |
| set_fecundity_at_szgroup(const vector< double > &_fecundity_at_szgroup) | Population | |
| set_FFmsy(const vector< double > &_FFmsy) | Population | |
| set_field_of_coeff_diffusion_this_pop(multimap< types::NodeId, double > _field_of_coeff_diffusion_this_pop) | Population | |
| set_full_spatial_availability(multimap< types::NodeId, double > _full_spatial_availability) | Population | |
| set_hyperstability_param(double _hyperstability_param) | Population | |
| set_is_choking_fisheries(int is_choking_fisheries) | Population | |
| set_juveniles_diet_preference_per_stock(const vector< double > &_juveniles_diet_preference_per_stock) | Population | |
| set_landings_so_far(double _landings_so_far) | Population | |
| set_list_nodes(vector< Node * > _list_nodes) | Population | |
| set_M_at_szgroup(const vector< double > &_M_at_szgroup) | Population | |
| set_maturity_at_szgroup(const vector< double > &_maturity_at_szgroup) | Population | |
| set_oth_land(map< types::NodeId, double > _oth_land) | Population | |
| set_oth_land_multiplier(double _a_multiplier) | Population | |
| set_overall_migration_fluxes(multimap< int, double > _overall_migration_fluxes) | Population | |
| set_param_sr(const vector< double > &_param_sr) | Population | |
| set_perceived_tot_F_at_age(const vector< double > &_perceived_F_at_age) | Population | |
| set_perceived_tot_N_at_age(const vector< double > &_perceived_N_at_age) | Population | |
| set_prop_migrants_in_tot_N_at_szgroup(const vector< double > &_prop_migrants_at_szgroup) | Population | |
| set_proportion_mature_fish(double _proportion_mature_fish) | Population | |
| set_proprecru_at_szgroup(const vector< double > &_proprecru_at_szgroup) | Population | |
| set_quota(double _quota) | Population | |
| set_quota_uptake(double _quota_uptake) | Population | |
| set_selected_szgroups(vector< int > selected_szgroups) | Population | |
| set_SSB(double _SSB) | Population | |
| set_SSB_at_szgroup(const vector< double > &_SSB_at_szgroup) | Population | |
| set_tot_C_at_szgroup(const vector< double > &_C_at_szgroup) | Population | |
| set_tot_D_at_szgroup(const vector< double > &_D_at_szgroup) | Population | |
| set_tot_F_at_age(const vector< double > &_F_at_age) | Population | |
| set_tot_F_at_age_last_quarter(const vector< double > &_tot_F_at_age_last_quarter) | Population | |
| set_tot_F_at_age_running_average(const vector< double > &_tot_F_at_age_running_average) | Population | |
| set_tot_M_at_age(const vector< double > &_M_at_age) | Population | |
| set_tot_Mat_at_age(const vector< double > &_Mat_at_age) | Population | |
| set_tot_N_at_age(const vector< double > &_N_at_age) | Population | |
| set_tot_N_at_age_last_quarter(const vector< double > &_N_at_age_last_quarter) | Population | |
| set_tot_N_at_szgroup(const vector< double > &_N_at_szgroup) | Population | |
| set_tot_N_at_szgroup_just_after_redistribution(const vector< double > &_N_at_szgroup_just_after_redistribution) | Population | |
| set_tot_N_at_szgroup_month_minus_1(const vector< double > &_N_at_szgroup_month_minus_1) | Population | |
| set_tot_N_at_szgroup_year_minus_1(const vector< double > &_N_at_szgroup_year_minus_1) | Population | |
| set_tot_W_at_age(const vector< double > &_W_at_age) | Population | |
| set_true_tot_N_at_szgroup(const vector< double > &_true_tot_N_at_szgroup) | Population | |
| set_weight_at_szgroup(const vector< double > &_weight_at_szgroup) | Population | |
| ~Population() | Population | virtual |
1.8.15